russian motif

Day 1 - July 11

10:00 10:40 Opening session
10:40 11:40 M.S.Gelfand   Comparative genomics. Problems and approaches.
12:00 12:50 D. Brown. Optimization and algebra in haplotype inference.
13:10 14:00 A. Shen. The complexity of constructive objects.
15:30 16:20 N.Przulj. Comparing and Modeling Protein-Protein Interaction Networks.
16:30 18:00 Discussion


russian motif

Day 2 - July 12

10:00 11:00 V.Yu. Makeev Algorithms for motif search.
11:20 12:10 B.Morgenstern Gene structure prediction in eukaryotes using heterogeneous sources of information.
12:30 13:20 E. Ukkonen Computational methods for haplotype reconstruction and for enhancer element prediction.
13:30 14:00 V. Boeva Statistical Measures of Significant Representation of Motifs and Motif Combinations.
15:30 16:00 O. Rokhlenko Flux Based vs. Topology Based Similarity of Metabolic Genes.
16:00 16:30 A. Favorov Markov chain Monte Carlo models for identification of significant combination of patterns.
16:50 18:00 Discussion


russian motif

Day 3 - July 13

10:00 11:00 A.V.Finkelstein Protein physics.
11:20 12:10 A.R. Rubinov Cluster methods in bioinformatics.
12:30 13:20 S. Nechaev Longest common subsequence of two random sequences.
13:30 14:00 Y Wexler A Study of Accessible Motifs and RNA Folding Complexity.
15:30 16:00 A. Loskutov What Can We Learn About Genom From 2-D DNA Walk?
16:00 16:30 V. A. Sorokin Efficient approach to the delineation of permuted domains in sequences of homologous proteins.
16:50 18:00 Discussion


russian motif

Extra

The extended abstracts will be presented in the book of abstract and can be discussed during the discussion sessions.
E.Aksyanov: Multiple alignment of beta-sheets.
A.Karyagina: Gene expression profiling: from microarrays to personalized medicine.
M.Roytberg: Pair-wise sequence-structure RNA alignment with affine gap penalty.
P. Vlasov: Conformation properties of short oligopeptides. Protein chain.
conformation prediction