October 7, Tuesday
9:30
Registration
9:45-10:00
Opening
10:00-11:00
Alternative splicing as a playground of evolution
Mikhail Gelfand, Institute for information transmission problems RAS, Moscow
11:00-11:30 discussion+break
11:30-12:30
Phageomics: a systematic way to study the process of phage infection
Konstantin Severinov, Institutes of Gene Biology and Molecular Genetics, Moscow, Russia and Waksman Institute, Rutgers University, Piscataway, USA
12:30-13:00 discussion+break
13:00-13:30
Gene position scoring within transcription regulation networks
Ivan Junier, Programme d'Epigenomique, Evry
13:30-14:00
Mining the semantics of genome super-blocks to infer ancestral architectures
Macha Nikolski, LaBRI, Université de Bordeaux, Talence, France
14:00-15:30 discussion+lunch
15:30-16:30
Global Sequencing: new high-throughput sequencing technologies, hudge bioinformatic challenges
Richard Christen. Université de Nice & CNRS UMR 6543. Centre de biochimie. Parc Valrose, Nice, France
16:30-17:00 discussion+break
17:00-18:00
Next-generation sequencing technology: new sequencing platforms, new frontiers, new algorithms
Valentina Boeva, Institut Curie, Paris
18:00 discussion+coffee
October 8, Wednesday
10:00-11:00
Virtual cell: methods and approaches (talk cancelled)
Fedor Kolpakov, Institute of System Biology, Design Technological Institute of Digital Techniques SB RAS Novosibirsk, Russia
10:00-11:00
Genomic Exploration of the Hemiascomycetous Yeasts
David Sherman, LaBRI and INRIA, Bordeaux, France
11:00-11:25 discussion+break
11:25-11:55
Computing efficiently the evolution distance from minisatellites
Jean-Marc Steyaert, Ecole Polytechnique, Palaiseau
11:55-12:55
How to model and to study the dynamics of the RNA secondary structure
Eugene Asarin, LIAFA Paris
12:55-13:10 discussion+break
13:10-13:45
Statistical sampling and rational design of RNA
Yann Ponty, LRI Orsay
13:45-14:00 discussion
13:00-15:30 Lunch
15:30-16:30
Blood as a new type of an active media. Space dynamic of clot formation and coagulation disorders
Fazly Ataullakhanov, Mikhail Panteleev
Center for theoretical problems of physico-chemical pharmacology RAS, Lomonosov Moscow State University, Physics Dept., National Center for Hematology, RAMS
16:30-17:30
Fazly Ataullakhanov, Center for theoretical problems of physico-chemical pharmacology RAS,
Lomonosov Moscow State University, Physics Dept., National Center for Hematology, RAMS
17:30-18:00 discussion+coffee
19:00 BANQUET
October 9, Thursday
10:00-11:00
Protein repeats: from sequence to structure and functions
Andrey V. Kajava, CRBM, CNRS, Montpellier
11:00-11:25 discussion+break
11:25-12:25
Recognition of protein function using local similarity
Dmitry A. Filimonov (Joint work with Boris N. Sobolev, Kirill E. Alexandrov, Vladimir V. Poroikov)
Institute of Biomedical Chemistry, Russian Academy of Medical Sciences, Pogodinskaya Str., 10, Moscow, 119121, Russia
12:25-12:50 discussion+break
12:50-13:20
Common intervals of chromosomes with paraloguous genes
Mathieu Raffinot, LIAFA Paris
13:20-13:50
Mireille Régnier, INRIA Rocquencourt
13:50-14:00 discussion
14:00-15:30 Lunch
15:30-16:00
Nicolas Turenne, INRA Jouy-en-Josas, France
16:00-17:00
Some questions of interpretation of results for DNA-protein binding on tiling arrays
Vsevolod Makeev, GosNIIGenetika Moscow
17:00-17:30 discussion+closure